Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMSS1Q9BQ75 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMSS1Q9BQ75 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMSS1Q9BQ75 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CMSS1Q9BQ75 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CMSS1Q9BQ75 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 AC079598.2-202ENST00000546624 1451 ntBASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 AC026185.1-201ENST00000445748 174 ntBASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CMSS1Q9BQ75 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 CDCA4P2-201ENST00000441182 718 ntBASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 AC139713.2-201ENST00000641328 2723 ntBASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 AL512353.2-201ENST00000448759 1962 ntBASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CMSS1Q9BQ75 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CMSS1Q9BQ75 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.14■□□□□ 0.17
CMSS1Q9BQ75 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms