Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 AP003071.4-201ENST00000562276 1284 ntBASIC17.54■□□□□ 0.4
TM9SF2Q99805 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TM9SF2Q99805 AC005332.8-201ENST00000622750 2735 ntBASIC17.54■□□□□ 0.4
TM9SF2Q99805 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TM9SF2Q99805 LTB4R2-202ENST00000528054 3092 ntBASIC17.53■□□□□ 0.4
TM9SF2Q99805 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 NIFKP9-201ENST00000419265 221 ntBASIC17.53■□□□□ 0.4
TM9SF2Q99805 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF2Q99805 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF2Q99805 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 AC104581.1-202ENST00000635932 2618 ntBASIC17.52■□□□□ 0.4
TM9SF2Q99805 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 TUBB8P6-201ENST00000436895 1288 ntBASIC17.52■□□□□ 0.4
TM9SF2Q99805 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF2Q99805 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TM9SF2Q99805 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF2Q99805 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TM9SF2Q99805 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms