Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 DUSP5P1-201ENST00000441325 1139 ntBASIC18.09■□□□□ 0.49
CMKLR1Q99788 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMKLR1Q99788 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMKLR1Q99788 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMKLR1Q99788 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMKLR1Q99788 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMKLR1Q99788 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CMKLR1Q99788 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.08■□□□□ 0.49
CMKLR1Q99788 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 AC099778.1-201ENST00000568593 1911 ntBASIC18.08■□□□□ 0.49
CMKLR1Q99788 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CMKLR1Q99788 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CMKLR1Q99788 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 RASA4DP-201ENST00000460726 1199 ntBASIC18.08■□□□□ 0.48
CMKLR1Q99788 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 CLEC4GP1-201ENST00000596555 870 ntBASIC18.08■□□□□ 0.48
CMKLR1Q99788 AL121894.2-201ENST00000602977 491 ntBASIC18.08■□□□□ 0.48
CMKLR1Q99788 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CMKLR1Q99788 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CMKLR1Q99788 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 ATP5G2P1-201ENST00000433580 426 ntBASIC18.07■□□□□ 0.48
CMKLR1Q99788 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 AL691432.3-201ENST00000621860 400 ntBASIC18.07■□□□□ 0.48
CMKLR1Q99788 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMKLR1Q99788 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CMKLR1Q99788 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 HBZP1-201ENST00000354915 429 ntBASIC18.06■□□□□ 0.48
CMKLR1Q99788 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 TPM4P1-201ENST00000436100 807 ntBASIC18.06■□□□□ 0.48
CMKLR1Q99788 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.06■□□□□ 0.48
CMKLR1Q99788 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMKLR1Q99788 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms