Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.08■□□□□ 0.81
PCDHB18PQ96TA0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB18PQ96TA0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 CKBP1-201ENST00000565489 1086 ntBASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 CD177P1-201ENST00000606252 935 ntBASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 AC068587.9-201ENST00000641814 219 ntBASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 KRT8P3-201ENST00000519669 1449 ntBASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB18PQ96TA0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 KRT8P32-201ENST00000512863 1461 ntBASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 FAM207BP-201ENST00000447172 505 ntBASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB18PQ96TA0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 RPS2P55-201ENST00000397318 883 ntBASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 AC107956.1-201ENST00000494359 873 ntBASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHB18PQ96TA0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms