Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.33■■□□□ 1.48
TUBGCP6Q96RT7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TUBGCP6Q96RT7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.48
TUBGCP6Q96RT7 PENK-208ENST00000523051 772 ntTSL 5 BASIC24.33■■□□□ 1.48
TUBGCP6Q96RT7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.33■■□□□ 1.48
TUBGCP6Q96RT7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
TUBGCP6Q96RT7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 NUS1P1-201ENST00000446295 882 ntBASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 KRT18P31-201ENST00000506277 1292 ntBASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TUBGCP6Q96RT7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 LINC00265-3P-201ENST00000447588 903 ntBASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 KRT16P4-201ENST00000453883 522 ntBASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 RNF126P1-202ENST00000569893 925 ntBASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 LINC00167-201ENST00000530583 1419 ntBASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 AC074051.2-201ENST00000565115 352 ntBASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBGCP6Q96RT7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 AC011498.5-201ENST00000592027 486 ntBASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TUBGCP6Q96RT7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 AL662844.1-201ENST00000546340 181 ntBASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 AL158211.5-201ENST00000623583 2518 ntBASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TUBGCP6Q96RT7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TUBGCP6Q96RT7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms