Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.83■□□□□ 0.45
NR1H4Q96RI1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 PTBP1P-201ENST00000554374 1601 ntBASIC17.83■□□□□ 0.44
NR1H4Q96RI1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NR1H4Q96RI1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NR1H4Q96RI1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 NKILA-202ENST00000614771 2598 ntBASIC17.81■□□□□ 0.44
NR1H4Q96RI1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.81■□□□□ 0.44
NR1H4Q96RI1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NR1H4Q96RI1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms