Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.67■□□□□ 0.42
MS4A4EQ96PG1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 AL512353.2-201ENST00000448759 1962 ntBASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 AC011506.1-201ENST00000474329 610 ntBASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 CKBP1-201ENST00000565489 1086 ntBASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 AC233702.5-201ENST00000584107 538 ntBASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 AC130371.2-201ENST00000619443 611 ntBASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MS4A4EQ96PG1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 AC008040.2-201ENST00000461049 708 ntBASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 NUDT16P1-203ENST00000513809 620 ntBASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MS4A4EQ96PG1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MS4A4EQ96PG1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MS4A4EQ96PG1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.64■□□□□ 0.42
MS4A4EQ96PG1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.64■□□□□ 0.42
MS4A4EQ96PG1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MS4A4EQ96PG1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.64■□□□□ 0.42
MS4A4EQ96PG1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 MESTP1-201ENST00000404287 994 ntBASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 DGCR10-201ENST00000609839 495 ntBASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AC113410.3-201ENST00000623366 203 ntBASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 AL049637.2-201ENST00000641778 930 ntBASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MS4A4EQ96PG1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms