Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 AC027601.4-201ENST00000611259 610 ntBASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CNTNAP3BQ96NU0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 PTBP1P-201ENST00000554374 1601 ntBASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 DNAJB3-201ENST00000446806 729 ntBASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 AC011467.4-201ENST00000594891 528 ntBASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 MIR7706-201ENST00000613747 67 ntBASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CNTNAP3BQ96NU0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3BQ96NU0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 MED15P5-201ENST00000423150 992 ntBASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 KRT16P6-202ENST00000425692 1426 ntBASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 AC116351.2-201ENST00000606540 1585 ntBASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3BQ96NU0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3BQ96NU0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms