Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.95■■□□□ 1.1
CHAMP1Q96JM3 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.95■■□□□ 1.1
CHAMP1Q96JM3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHAMP1Q96JM3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHAMP1Q96JM3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHAMP1Q96JM3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 AC060766.5-201ENST00000590539 871 ntBASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CHAMP1Q96JM3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 AC097658.1-201ENST00000475555 843 ntBASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CHAMP1Q96JM3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 HLA-A-209ENST00000638375 975 ntBASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CHAMP1Q96JM3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 ABALON-201ENST00000629058 1903 ntBASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.91■■□□□ 1.1
CHAMP1Q96JM3 AC008687.6-201ENST00000596318 630 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms