Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 TERF1P5-201ENST00000477545 1207 ntBASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP6Q96FZ7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 AC134043.2-201ENST00000624206 2238 ntBASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CHMP6Q96FZ7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 AL162430.1-201ENST00000480705 870 ntBASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP6Q96FZ7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 HTR7P1-202ENST00000624664 4411 ntBASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 AL591742.1-201ENST00000604433 565 ntBASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP6Q96FZ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms