Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.49■□□□□ 0.71
HDAC11Q96DB2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 NUDT16P1-203ENST00000513809 620 ntBASIC19.48■□□□□ 0.71
HDAC11Q96DB2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HDAC11Q96DB2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 Z99916.2-201ENST00000604037 246 ntBASIC19.47■□□□□ 0.71
HDAC11Q96DB2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HDAC11Q96DB2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 FAM207BP-201ENST00000447172 505 ntBASIC19.46■□□□□ 0.71
HDAC11Q96DB2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 AC116562.2-201ENST00000507042 360 ntBASIC19.46■□□□□ 0.71
HDAC11Q96DB2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 CROCCP3-202ENST00000420820 1947 ntBASIC19.46■□□□□ 0.71
HDAC11Q96DB2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.46■□□□□ 0.71
HDAC11Q96DB2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 AC008550.1-201ENST00000511500 884 ntBASIC19.45■□□□□ 0.7
HDAC11Q96DB2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.45■□□□□ 0.7
HDAC11Q96DB2 AP000692.2-201ENST00000608391 879 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms