Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 AL121956.5-201ENST00000625261 221 ntBASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 AL032819.2-201ENST00000624543 2162 ntBASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A1Q93050 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 FAM86EP-206ENST00000510506 987 ntBASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 KRT8P3-201ENST00000519669 1449 ntBASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 FEM1AP3-201ENST00000403722 1741 ntBASIC21.18■□□□□ 0.98
ATP6V0A1Q93050 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 PCED1CP-201ENST00000419887 785 ntBASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 AL671277.2-201ENST00000458060 996 ntBASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 IRX1P1-201ENST00000438849 1838 ntBASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A1Q93050 AC007952.6-201ENST00000573168 2673 ntBASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AC003957.1-201ENST00000625108 2673 ntBASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AP000523.1-201ENST00000398242 1049 ntBASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 AC008622.2-201ENST00000617006 1229 ntBASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP6V0A1Q93050 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP6V0A1Q93050 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms