Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 AC005829.2-201ENST00000571422 1056 ntBASIC17.12■□□□□ 0.33
APH1BQ8WW43 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.12■□□□□ 0.33
APH1BQ8WW43 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1BQ8WW43 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 AL512625.2-201ENST00000417533 625 ntBASIC17.11■□□□□ 0.33
APH1BQ8WW43 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 AC005181.1-201ENST00000604782 1256 ntBASIC17.11■□□□□ 0.33
APH1BQ8WW43 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 AC009053.2-201ENST00000563701 2365 ntBASIC17.11■□□□□ 0.33
APH1BQ8WW43 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1BQ8WW43 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.11■□□□□ 0.33
APH1BQ8WW43 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
APH1BQ8WW43 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 MIR638-201ENST00000385237 100 ntBASIC17.1■□□□□ 0.33
APH1BQ8WW43 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 AL390719.1-204ENST00000412397 1219 ntBASIC17.1■□□□□ 0.33
APH1BQ8WW43 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
APH1BQ8WW43 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1BQ8WW43 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 LSM12P1-201ENST00000411836 588 ntBASIC17.09■□□□□ 0.33
APH1BQ8WW43 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 HEIH-201ENST00000623091 1652 ntBASIC17.09■□□□□ 0.33
APH1BQ8WW43 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.09■□□□□ 0.33
APH1BQ8WW43 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1BQ8WW43 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1BQ8WW43 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1BQ8WW43 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms