Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 AC026366.1-201ENST00000488803 879 ntBASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 AC093525.10-201ENST00000625130 1569 ntBASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLHC1Q8NHS4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 KRASP1-201ENST00000407852 552 ntBASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLHC1Q8NHS4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 TSPY23P-201ENST00000440136 739 ntBASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.17■□□□□ 0.5
CLHC1Q8NHS4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 AC239809.2-201ENST00000415381 517 ntBASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLHC1Q8NHS4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms