Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC135050.7-201ENST00000624508 2218 ntBASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PWWP2AP1-201ENST00000429776 2273 ntBASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 AL162377.1-201ENST00000618844 1793 ntBASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 MIR6765-201ENST00000614092 87 ntBASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 AC133552.2-201ENST00000619106 1032 ntBASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.4□□□□□ -0.74
SPTSSBQ8NFR3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SPTSSBQ8NFR3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SPTSSBQ8NFR3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
SPTSSBQ8NFR3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SPTSSBQ8NFR3 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
SPTSSBQ8NFR3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SPTSSBQ8NFR3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 LONRF2P2-201ENST00000439212 571 ntBASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 AC087239.1-201ENST00000622671 572 ntBASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 AC008741.2-201ENST00000612792 3115 ntBASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SPTSSBQ8NFR3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms