Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 AC112907.2-201ENST00000448639 330 ntBASIC20.61■□□□□ 0.89
RNF169Q8NCN4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 CR769767.2-201ENST00000622735 460 ntBASIC20.61■□□□□ 0.89
RNF169Q8NCN4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF169Q8NCN4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 VENTXP5-201ENST00000523979 775 ntBASIC20.59■□□□□ 0.89
RNF169Q8NCN4 NEK4P2-201ENST00000580004 1012 ntBASIC20.59■□□□□ 0.89
RNF169Q8NCN4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
RNF169Q8NCN4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 GPAT2P1-201ENST00000444924 1672 ntBASIC20.58■□□□□ 0.89
RNF169Q8NCN4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.58■□□□□ 0.89
RNF169Q8NCN4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF169Q8NCN4 AFG3L1P-217ENST00000557444 2447 ntBASIC20.58■□□□□ 0.88
RNF169Q8NCN4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF169Q8NCN4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF169Q8NCN4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RNF169Q8NCN4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF169Q8NCN4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 AC005332.1-201ENST00000577698 1310 ntBASIC20.57■□□□□ 0.88
RNF169Q8NCN4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF169Q8NCN4 AC125437.2-201ENST00000625180 2167 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms