Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEFF1Q8IYR6 AC073130.3-201ENST00000624389 2278 ntBASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 AL023284.2-201ENST00000405850 579 ntBASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEFF1Q8IYR6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 SDHAP1-207ENST00000440850 2000 ntBASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 AL162741.1-201ENST00000565563 1558 ntBASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEFF1Q8IYR6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 AC079602.3-201ENST00000623931 403 ntBASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEFF1Q8IYR6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 KRT8P26-201ENST00000534154 1276 ntBASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.77■□□□□ 0.6
TMEFF1Q8IYR6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms