Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 RARRES2P10-201ENST00000564312 460 ntBASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 AC026271.3-201ENST00000571884 352 ntBASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 ANO7L1-203ENST00000602586 1720 ntBASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 RCC2P6-201ENST00000526625 1557 ntBASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 WIZP1-201ENST00000531444 2299 ntBASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 AC004951.3-201ENST00000418645 1148 ntBASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDKL3Q8IVW4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AC091390.4-202ENST00000476426 537 ntBASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 FAM197Y4-202ENST00000622692 608 ntBASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AL031985.4-201ENST00000642138 673 ntBASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDKL3Q8IVW4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms