Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 AC004951.3-201ENST00000418645 1148 ntBASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 AC098590.1-201ENST00000468126 897 ntBASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 PRSS44-201ENST00000515154 1146 ntBASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIST2H3AQ71DI3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 AL135905.2-201ENST00000584934 1404 ntBASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 GCSHP5-201ENST00000443090 522 ntBASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 AC142381.4-202ENST00000563973 229 ntBASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 AC130371.2-201ENST00000619443 611 ntBASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 CR392000.1-201ENST00000624770 1228 ntBASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.62■□□□□ 0.25
HIST2H3AQ71DI3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 HCG11-201ENST00000411553 5696 ntBASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 Z98044.1-201ENST00000632503 1764 ntBASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST2H3AQ71DI3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms