Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXR1Q6PIV2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 AC069544.1-201ENST00000609399 999 ntBASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXR1Q6PIV2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 FP475955.4-201ENST00000623131 1990 ntBASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXR1Q6PIV2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXR1Q6PIV2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXR1Q6PIV2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms