Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 RCC2P3-201ENST00000418112 1537 ntBASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR3Q6P9H4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 AL662844.1-201ENST00000546340 181 ntBASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 SLC25A6P4-201ENST00000586535 553 ntBASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 GPALPP1-207ENST00000611650 899 ntBASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 IGHV3-41-201ENST00000613121 348 ntBASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNKSR3Q6P9H4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 AC138894.3-201ENST00000603787 634 ntBASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 AL512353.2-201ENST00000448759 1962 ntBASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR3Q6P9H4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 AC008556.1-201ENST00000610908 2040 ntBASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 AL121912.1-201ENST00000603683 238 ntBASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 AC004263.2-201ENST00000617183 678 ntBASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.33■□□□□ 0.85
CNKSR3Q6P9H4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 AC233702.3-201ENST00000578656 1387 ntBASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.33■□□□□ 0.84
CNKSR3Q6P9H4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNKSR3Q6P9H4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms