Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 AP003097.1-201ENST00000530657 1135 ntBASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 AP001271.2-201ENST00000624018 1556 ntBASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 AL121906.2-201ENST00000621597 723 ntBASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM53Q6P2H8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 KRT17P3-201ENST00000420566 1262 ntBASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 AC026366.1-201ENST00000488803 879 ntBASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM53Q6P2H8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 POM121L13P-201ENST00000422362 380 ntBASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 AL691432.2-201ENST00000607222 2038 ntBASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 AC018695.7-201ENST00000624587 2492 ntBASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 PCDHA12-202ENST00000613593 2588 ntBASIC17.29■□□□□ 0.36
TMEM53Q6P2H8 TMEM179-206ENST00000616017 1645 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms