Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 AC092647.4-201ENST00000457211 535 ntBASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 LINC01238-205ENST00000567549 1107 ntBASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 NEK4P2-201ENST00000580004 1012 ntBASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SWSAP1Q6NVH7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SWSAP1Q6NVH7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SWSAP1Q6NVH7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SWSAP1Q6NVH7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SWSAP1Q6NVH7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 AL512353.2-201ENST00000448759 1962 ntBASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 MCCD1P1-208ENST00000445732 328 ntBASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.07■□□□□ 0.96
SWSAP1Q6NVH7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 AC036111.1-201ENST00000533973 1582 ntBASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 AP000523.1-201ENST00000398242 1049 ntBASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 GCSHP2-201ENST00000560971 527 ntBASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SWSAP1Q6NVH7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SWSAP1Q6NVH7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms