Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 KRT18P5-201ENST00000436075 1291 ntBASIC16.91■□□□□ 0.3
CCDC58Q4VC31 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC58Q4VC31 AL354751.1-201ENST00000412768 1863 ntBASIC16.9■□□□□ 0.3
CCDC58Q4VC31 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 YBX1P10-201ENST00000444752 975 ntBASIC16.9■□□□□ 0.3
CCDC58Q4VC31 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC58Q4VC31 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC58Q4VC31 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC58Q4VC31 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC58Q4VC31 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC58Q4VC31 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC58Q4VC31 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 AC133552.2-202ENST00000575694 574 ntBASIC16.89■□□□□ 0.29
CCDC58Q4VC31 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC58Q4VC31 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC58Q4VC31 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms