Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 KRT18P35-201ENST00000510488 1269 ntBASIC18.63■□□□□ 0.57
CDK3Q00526 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.63■□□□□ 0.57
CDK3Q00526 AL445228.2-201ENST00000605589 952 ntBASIC18.63■□□□□ 0.57
CDK3Q00526 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 AL023973.1-201ENST00000624619 620 ntBASIC18.63■□□□□ 0.57
CDK3Q00526 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 AL031432.5-201ENST00000641059 760 ntBASIC18.63■□□□□ 0.57
CDK3Q00526 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
CDK3Q00526 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.63■□□□□ 0.57
CDK3Q00526 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDK3Q00526 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CDK3Q00526 AL512353.2-201ENST00000448759 1962 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
CDK3Q00526 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.62■□□□□ 0.57
CDK3Q00526 AP000523.1-201ENST00000398242 1049 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK3Q00526 AC063952.2-201ENST00000498792 1227 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.62■□□□□ 0.57
CDK3Q00526 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDK3Q00526 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 NEK4P2-201ENST00000580004 1012 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 AC011558.1-201ENST00000623459 338 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK3Q00526 AC036111.1-201ENST00000533973 1582 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDK3Q00526 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK3Q00526 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK3Q00526 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 AC116562.4-201ENST00000641316 2276 ntBASIC18.62■□□□□ 0.57
CDK3Q00526 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK3Q00526 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDK3Q00526 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.61■□□□□ 0.57
CDK3Q00526 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CDK3Q00526 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK3Q00526 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK3Q00526 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK3Q00526 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.61■□□□□ 0.57
CDK3Q00526 TSPY5P-201ENST00000426936 936 ntBASIC18.61■□□□□ 0.57
CDK3Q00526 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK3Q00526 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK3Q00526 AC022616.7-201ENST00000525383 220 ntBASIC18.61■□□□□ 0.57
CDK3Q00526 MIR3180-5-201ENST00000583743 153 ntBASIC18.61■□□□□ 0.57
CDK3Q00526 AC140113.3-201ENST00000605663 199 ntBASIC18.61■□□□□ 0.57
CDK3Q00526 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK3Q00526 AIRN-201ENST00000601203 4374 ntBASIC18.6■□□□□ 0.57
CDK3Q00526 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 RCC2P3-201ENST00000418112 1537 ntBASIC18.6■□□□□ 0.57
CDK3Q00526 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK3Q00526 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK3Q00526 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK3Q00526 AL441883.1-201ENST00000566170 1045 ntBASIC18.6■□□□□ 0.57
CDK3Q00526 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK3Q00526 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK3Q00526 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.6■□□□□ 0.57
CDK3Q00526 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK3Q00526 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK3Q00526 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK3Q00526 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK3Q00526 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK3Q00526 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK3Q00526 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK3Q00526 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK3Q00526 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms