Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB1AP62820 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
RAB1AP62820 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB1AP62820 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAB1AP62820 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB1AP62820 CRYGFP-201ENST00000418459 633 ntBASIC16.64■□□□□ 0.25
RAB1AP62820 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAB1AP62820 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB1AP62820 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB1AP62820 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.64■□□□□ 0.25
RAB1AP62820 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB1AP62820 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB1AP62820 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB1AP62820 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB1AP62820 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB1AP62820 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB1AP62820 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB1AP62820 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.64■□□□□ 0.25
RAB1AP62820 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB1AP62820 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB1AP62820 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB1AP62820 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 FEM1AP3-201ENST00000403722 1741 ntBASIC16.63■□□□□ 0.25
RAB1AP62820 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RAB1AP62820 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB1AP62820 TSPY15P-201ENST00000457163 923 ntBASIC16.63■□□□□ 0.25
RAB1AP62820 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB1AP62820 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB1AP62820 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB1AP62820 CKBP1-201ENST00000565489 1086 ntBASIC16.63■□□□□ 0.25
RAB1AP62820 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 IRX1P1-201ENST00000438849 1838 ntBASIC16.63■□□□□ 0.25
RAB1AP62820 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB1AP62820 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB1AP62820 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 FP475955.4-201ENST00000623131 1990 ntBASIC16.62■□□□□ 0.25
RAB1AP62820 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB1AP62820 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB1AP62820 AC079598.2-202ENST00000546624 1451 ntBASIC16.62■□□□□ 0.25
RAB1AP62820 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RAB1AP62820 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.62■□□□□ 0.25
RAB1AP62820 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 MFAP1P1-201ENST00000442257 1255 ntBASIC16.62■□□□□ 0.25
RAB1AP62820 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB1AP62820 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB1AP62820 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB1AP62820 AP000525.1-201ENST00000608286 694 ntBASIC16.62■□□□□ 0.25
RAB1AP62820 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RAB1AP62820 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
RAB1AP62820 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB1AP62820 AC096733.2-201ENST00000609937 1394 ntBASIC16.62■□□□□ 0.25
RAB1AP62820 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms