Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
AP1S1P61966 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
AP1S1P61966 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AP1S1P61966 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.06■□□□□ 0.64
AP1S1P61966 AL049812.1-201ENST00000432563 2267 ntBASIC19.05■□□□□ 0.64
AP1S1P61966 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
AP1S1P61966 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
AP1S1P61966 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 KRT8P32-201ENST00000512863 1461 ntBASIC19.05■□□□□ 0.64
AP1S1P61966 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.05■□□□□ 0.64
AP1S1P61966 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
AP1S1P61966 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.05■□□□□ 0.64
AP1S1P61966 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 AL512604.3-201ENST00000569583 964 ntBASIC19.05■□□□□ 0.64
AP1S1P61966 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
AP1S1P61966 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
AP1S1P61966 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.05■□□□□ 0.64
AP1S1P61966 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
AP1S1P61966 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AP1S1P61966 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
AP1S1P61966 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
AP1S1P61966 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
AP1S1P61966 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 AL023284.2-201ENST00000405850 579 ntBASIC19.04■□□□□ 0.64
AP1S1P61966 AC113347.1-201ENST00000413321 391 ntBASIC19.04■□□□□ 0.64
AP1S1P61966 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.04■□□□□ 0.64
AP1S1P61966 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.04■□□□□ 0.64
AP1S1P61966 MIR4674-201ENST00000582457 87 ntBASIC19.04■□□□□ 0.64
AP1S1P61966 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.04■□□□□ 0.64
AP1S1P61966 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 GPAT2P1-201ENST00000444924 1672 ntBASIC19.04■□□□□ 0.64
AP1S1P61966 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.04■□□□□ 0.64
AP1S1P61966 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
AP1S1P61966 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP1S1P61966 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.03■□□□□ 0.64
AP1S1P61966 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
AP1S1P61966 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
AP1S1P61966 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.03■□□□□ 0.64
AP1S1P61966 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S1P61966 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.03■□□□□ 0.64
AP1S1P61966 MCCD1P1-208ENST00000445732 328 ntBASIC19.03■□□□□ 0.64
AP1S1P61966 AC083906.6-201ENST00000641366 219 ntBASIC19.03■□□□□ 0.64
AP1S1P61966 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.03■□□□□ 0.64
AP1S1P61966 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
AP1S1P61966 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
AP1S1P61966 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP1S1P61966 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.03■□□□□ 0.64
AP1S1P61966 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
AP1S1P61966 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.02■□□□□ 0.64
AP1S1P61966 AL109659.2-201ENST00000606809 1674 ntBASIC19.02■□□□□ 0.64
AP1S1P61966 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
AP1S1P61966 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP1S1P61966 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms