Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ZC3H6P61129 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC25.28■■□□□ 1.64
ZC3H6P61129 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.27■■□□□ 1.64
ZC3H6P61129 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ZC3H6P61129 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC25.27■■□□□ 1.64
ZC3H6P61129 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
ZC3H6P61129 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ZC3H6P61129 KRT18P23-201ENST00000435622 1283 ntBASIC25.27■■□□□ 1.64
ZC3H6P61129 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC25.27■■□□□ 1.64
ZC3H6P61129 AL662844.1-201ENST00000546340 181 ntBASIC25.27■■□□□ 1.64
ZC3H6P61129 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC25.27■■□□□ 1.64
ZC3H6P61129 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.27■■□□□ 1.64
ZC3H6P61129 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
ZC3H6P61129 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
ZC3H6P61129 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC25.27■■□□□ 1.64
ZC3H6P61129 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ZC3H6P61129 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC25.26■■□□□ 1.63
ZC3H6P61129 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC25.26■■□□□ 1.63
ZC3H6P61129 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ZC3H6P61129 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ZC3H6P61129 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC25.26■■□□□ 1.63
ZC3H6P61129 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ZC3H6P61129 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 TSPY12P-201ENST00000421279 868 ntBASIC25.26■■□□□ 1.63
ZC3H6P61129 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC25.26■■□□□ 1.63
ZC3H6P61129 AC120114.3-201ENST00000611923 658 ntBASIC25.26■■□□□ 1.63
ZC3H6P61129 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.26■■□□□ 1.63
ZC3H6P61129 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 AC233702.3-201ENST00000578656 1387 ntBASIC25.26■■□□□ 1.63
ZC3H6P61129 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25.26■■□□□ 1.63
ZC3H6P61129 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ZC3H6P61129 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
ZC3H6P61129 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC25.25■■□□□ 1.63
ZC3H6P61129 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.25■■□□□ 1.63
ZC3H6P61129 AP003733.1-201ENST00000491725 852 ntBASIC25.25■■□□□ 1.63
ZC3H6P61129 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.25■■□□□ 1.63
ZC3H6P61129 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.25■■□□□ 1.63
ZC3H6P61129 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC25.25■■□□□ 1.63
ZC3H6P61129 AC090616.6-201ENST00000582640 721 ntBASIC25.25■■□□□ 1.63
ZC3H6P61129 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC25.25■■□□□ 1.63
ZC3H6P61129 AL390719.2-201ENST00000606993 987 ntBASIC25.25■■□□□ 1.63
ZC3H6P61129 AC010240.3-201ENST00000607688 395 ntBASIC25.25■■□□□ 1.63
ZC3H6P61129 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC25.25■■□□□ 1.63
ZC3H6P61129 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ZC3H6P61129 AC008556.1-201ENST00000610908 2040 ntBASIC25.25■■□□□ 1.63
ZC3H6P61129 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ZC3H6P61129 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 AKR1C7P-201ENST00000305623 895 ntBASIC25.24■■□□□ 1.63
ZC3H6P61129 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
ZC3H6P61129 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.24■■□□□ 1.63
ZC3H6P61129 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.24■■□□□ 1.63
ZC3H6P61129 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.24■■□□□ 1.63
ZC3H6P61129 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ZC3H6P61129 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
ZC3H6P61129 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H6P61129 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC25.23■■□□□ 1.63
ZC3H6P61129 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.23■■□□□ 1.63
ZC3H6P61129 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H6P61129 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.23■■□□□ 1.63
ZC3H6P61129 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC25.23■■□□□ 1.63
ZC3H6P61129 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC25.23■■□□□ 1.63
ZC3H6P61129 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.23■■□□□ 1.63
ZC3H6P61129 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC25.23■■□□□ 1.63
ZC3H6P61129 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC25.23■■□□□ 1.63
ZC3H6P61129 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC25.23■■□□□ 1.63
ZC3H6P61129 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
ZC3H6P61129 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms