Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMIM11AP58511 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMIM11AP58511 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMIM11AP58511 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM11AP58511 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SMIM11AP58511 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SMIM11AP58511 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM11AP58511 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMIM11AP58511 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.46■□□□□ 0.39
SMIM11AP58511 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.46■□□□□ 0.39
SMIM11AP58511 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.46■□□□□ 0.39
SMIM11AP58511 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMIM11AP58511 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.46■□□□□ 0.39
SMIM11AP58511 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SMIM11AP58511 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SMIM11AP58511 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM11AP58511 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.46■□□□□ 0.39
SMIM11AP58511 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMIM11AP58511 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMIM11AP58511 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM11AP58511 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM11AP58511 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.45■□□□□ 0.38
SMIM11AP58511 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.45■□□□□ 0.38
SMIM11AP58511 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.45■□□□□ 0.38
SMIM11AP58511 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.45■□□□□ 0.38
SMIM11AP58511 MYC-209ENST00000641252 345 ntBASIC17.45■□□□□ 0.38
SMIM11AP58511 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SMIM11AP58511 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.45■□□□□ 0.38
SMIM11AP58511 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.45■□□□□ 0.38
SMIM11AP58511 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SMIM11AP58511 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM11AP58511 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMIM11AP58511 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SMIM11AP58511 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM11AP58511 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM11AP58511 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM11AP58511 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SMIM11AP58511 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM11AP58511 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMIM11AP58511 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 AL160286.2-201ENST00000567150 934 ntBASIC17.44■□□□□ 0.38
SMIM11AP58511 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 AC008687.6-201ENST00000596318 630 ntBASIC17.44■□□□□ 0.38
SMIM11AP58511 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM11AP58511 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM11AP58511 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM11AP58511 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms