Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN6P56747 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.17■□□□□ 0.5
CLDN6P56747 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN6P56747 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLDN6P56747 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN6P56747 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN6P56747 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN6P56747 AC104417.2-201ENST00000562989 1793 ntBASIC18.17■□□□□ 0.5
CLDN6P56747 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN6P56747 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLDN6P56747 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN6P56747 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
CLDN6P56747 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN6P56747 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN6P56747 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN6P56747 AL157888.1-201ENST00000631930 593 ntBASIC18.16■□□□□ 0.5
CLDN6P56747 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLDN6P56747 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 KRT18P1-202ENST00000452408 1331 ntBASIC18.16■□□□□ 0.5
CLDN6P56747 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN6P56747 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN6P56747 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN6P56747 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN6P56747 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN6P56747 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN6P56747 AL022342.1-201ENST00000400363 863 ntBASIC18.15■□□□□ 0.5
CLDN6P56747 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 AP000867.3-201ENST00000524675 377 ntBASIC18.15■□□□□ 0.5
CLDN6P56747 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN6P56747 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN6P56747 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN6P56747 AC009237.14-201ENST00000609975 1594 ntBASIC18.15■□□□□ 0.5
CLDN6P56747 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN6P56747 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN6P56747 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN6P56747 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLDN6P56747 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN6P56747 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN6P56747 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.14■□□□□ 0.5
CLDN6P56747 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CLDN6P56747 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN6P56747 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLDN6P56747 AL023284.2-201ENST00000405850 579 ntBASIC18.14■□□□□ 0.49
CLDN6P56747 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN6P56747 FAAHP1-202ENST00000446499 1238 ntBASIC18.14■□□□□ 0.49
CLDN6P56747 LINC00265-3P-201ENST00000447588 903 ntBASIC18.14■□□□□ 0.49
CLDN6P56747 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.14■□□□□ 0.49
CLDN6P56747 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 AC023511.2-201ENST00000618803 211 ntBASIC18.14■□□□□ 0.49
CLDN6P56747 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN6P56747 SDHAP1-207ENST00000440850 2000 ntBASIC18.14■□□□□ 0.49
CLDN6P56747 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLDN6P56747 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN6P56747 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN6P56747 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN6P56747 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms