Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH8P55286 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDH8P55286 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDH8P55286 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.19■□□□□ 0.82
CDH8P55286 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH8P55286 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH8P55286 AC128688.1-201ENST00000487626 519 ntBASIC20.19■□□□□ 0.82
CDH8P55286 MIR4674-201ENST00000582457 87 ntBASIC20.19■□□□□ 0.82
CDH8P55286 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH8P55286 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDH8P55286 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 AC087289.5-201ENST00000586076 3175 ntBASIC20.19■□□□□ 0.82
CDH8P55286 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH8P55286 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH8P55286 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH8P55286 AP000974.1-201ENST00000623909 2387 ntBASIC20.19■□□□□ 0.82
CDH8P55286 AIRN-201ENST00000601203 4374 ntBASIC20.18■□□□□ 0.82
CDH8P55286 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH8P55286 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.18■□□□□ 0.82
CDH8P55286 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDH8P55286 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CDH8P55286 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CDH8P55286 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CDH8P55286 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH8P55286 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH8P55286 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH8P55286 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH8P55286 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDH8P55286 AL512353.2-201ENST00000448759 1962 ntBASIC20.17■□□□□ 0.82
CDH8P55286 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CDH8P55286 GPAT2P1-201ENST00000444924 1672 ntBASIC20.17■□□□□ 0.82
CDH8P55286 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH8P55286 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH8P55286 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH8P55286 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
CDH8P55286 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH8P55286 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH8P55286 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH8P55286 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDH8P55286 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH8P55286 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDH8P55286 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDH8P55286 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH8P55286 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 SLC25A3P1-201ENST00000443844 931 ntBASIC20.16■□□□□ 0.82
CDH8P55286 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.16■□□□□ 0.82
CDH8P55286 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH8P55286 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDH8P55286 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDH8P55286 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH8P55286 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH8P55286 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH8P55286 AC098818.2-201ENST00000564925 2320 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms