Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGA2P52926 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGA2P52926 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGA2P52926 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGA2P52926 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGA2P52926 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGA2P52926 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMGA2P52926 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGA2P52926 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGA2P52926 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGA2P52926 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGA2P52926 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 C1QL1P1-201ENST00000568105 661 ntBASIC17.29■□□□□ 0.36
HMGA2P52926 SOX15-203ENST00000570788 1093 ntBASIC17.29■□□□□ 0.36
HMGA2P52926 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.29■□□□□ 0.36
HMGA2P52926 AL137784.2-201ENST00000607332 1000 ntBASIC17.29■□□□□ 0.36
HMGA2P52926 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGA2P52926 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGA2P52926 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMGA2P52926 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGA2P52926 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGA2P52926 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGA2P52926 AC067852.2-201ENST00000590513 2313 ntBASIC17.29■□□□□ 0.36
HMGA2P52926 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMGA2P52926 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGA2P52926 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGA2P52926 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGA2P52926 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGA2P52926 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGA2P52926 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGA2P52926 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGA2P52926 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.28■□□□□ 0.36
HMGA2P52926 AC083880.1-201ENST00000608266 535 ntBASIC17.28■□□□□ 0.36
HMGA2P52926 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.28■□□□□ 0.36
HMGA2P52926 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGA2P52926 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMGA2P52926 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGA2P52926 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HMGA2P52926 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGA2P52926 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HMGA2P52926 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HMGA2P52926 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HMGA2P52926 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HMGA2P52926 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.27■□□□□ 0.36
HMGA2P52926 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGA2P52926 AC006970.2-201ENST00000450065 779 ntBASIC17.27■□□□□ 0.36
HMGA2P52926 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGA2P52926 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms