Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 TSPY5P-201ENST00000426936 936 ntBASIC16.91■□□□□ 0.3
LHX2P50458 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.91■□□□□ 0.3
LHX2P50458 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
LHX2P50458 AL023973.1-201ENST00000624619 620 ntBASIC16.91■□□□□ 0.3
LHX2P50458 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
LHX2P50458 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX2P50458 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX2P50458 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 AC036111.1-201ENST00000533973 1582 ntBASIC16.9■□□□□ 0.3
LHX2P50458 AC116562.4-201ENST00000641316 2276 ntBASIC16.9■□□□□ 0.3
LHX2P50458 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
LHX2P50458 AP000523.1-201ENST00000398242 1049 ntBASIC16.9■□□□□ 0.3
LHX2P50458 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.9■□□□□ 0.3
LHX2P50458 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.9■□□□□ 0.3
LHX2P50458 AC022616.7-201ENST00000525383 220 ntBASIC16.9■□□□□ 0.3
LHX2P50458 AL441883.1-201ENST00000566170 1045 ntBASIC16.9■□□□□ 0.3
LHX2P50458 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 MIR3180-5-201ENST00000583743 153 ntBASIC16.9■□□□□ 0.3
LHX2P50458 AC140113.3-201ENST00000605663 199 ntBASIC16.9■□□□□ 0.3
LHX2P50458 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LHX2P50458 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 RCC2P3-201ENST00000418112 1537 ntBASIC16.9■□□□□ 0.3
LHX2P50458 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX2P50458 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX2P50458 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.89■□□□□ 0.3
LHX2P50458 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.89■□□□□ 0.3
LHX2P50458 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.89■□□□□ 0.3
LHX2P50458 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LHX2P50458 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LHX2P50458 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX2P50458 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.89■□□□□ 0.29
LHX2P50458 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 KRT8P32-201ENST00000512863 1461 ntBASIC16.89■□□□□ 0.29
LHX2P50458 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
LHX2P50458 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX2P50458 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LHX2P50458 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.89■□□□□ 0.29
LHX2P50458 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.89■□□□□ 0.29
LHX2P50458 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.89■□□□□ 0.29
LHX2P50458 NTF6B-201ENST00000591913 560 ntBASIC16.89■□□□□ 0.29
LHX2P50458 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LHX2P50458 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX2P50458 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.89■□□□□ 0.29
LHX2P50458 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX2P50458 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX2P50458 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LHX2P50458 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 AL109659.2-201ENST00000606809 1674 ntBASIC16.88■□□□□ 0.29
LHX2P50458 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX2P50458 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX2P50458 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LHX2P50458 FAM8A6P-201ENST00000407496 1135 ntBASIC16.88■□□□□ 0.29
LHX2P50458 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX2P50458 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.88■□□□□ 0.29
LHX2P50458 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LHX2P50458 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.88■□□□□ 0.29
LHX2P50458 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.88■□□□□ 0.29
LHX2P50458 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX2P50458 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX2P50458 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms