Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 AL355355.2-201ENST00000442321 338 ntBASIC16.86■□□□□ 0.29
CSNK1A1P48729 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 AC130371.2-201ENST00000619443 611 ntBASIC16.86■□□□□ 0.29
CSNK1A1P48729 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 AC090340.1-201ENST00000620778 4980 ntBASIC16.86■□□□□ 0.29
CSNK1A1P48729 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CSNK1A1P48729 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CSNK1A1P48729 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AC008040.2-201ENST00000461049 708 ntBASIC16.85■□□□□ 0.29
CSNK1A1P48729 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CSNK1A1P48729 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.85■□□□□ 0.29
CSNK1A1P48729 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 TNXA-203ENST00000507684 2038 ntBASIC16.84■□□□□ 0.29
CSNK1A1P48729 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AC026471.5-201ENST00000615068 467 ntBASIC16.84■□□□□ 0.29
CSNK1A1P48729 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.84■□□□□ 0.29
CSNK1A1P48729 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSNK1A1P48729 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSNK1A1P48729 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CSNK1A1P48729 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSNK1A1P48729 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms