Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SOX2P48431 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.67■□□□□ 0.26
SOX2P48431 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SOX2P48431 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SOX2P48431 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SOX2P48431 AL354751.1-201ENST00000412768 1863 ntBASIC16.67■□□□□ 0.26
SOX2P48431 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX2P48431 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SOX2P48431 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SOX2P48431 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SOX2P48431 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 MIPEPP3-201ENST00000412105 444 ntBASIC16.66■□□□□ 0.26
SOX2P48431 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SOX2P48431 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.66■□□□□ 0.26
SOX2P48431 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 MIR5787-201ENST00000611784 55 ntBASIC16.66■□□□□ 0.26
SOX2P48431 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SOX2P48431 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
SOX2P48431 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SOX2P48431 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SOX2P48431 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SOX2P48431 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX2P48431 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SOX2P48431 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SOX2P48431 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX2P48431 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX2P48431 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX2P48431 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.65■□□□□ 0.26
SOX2P48431 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.65■□□□□ 0.26
SOX2P48431 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX2P48431 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX2P48431 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SOX2P48431 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX2P48431 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SOX2P48431 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX2P48431 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 PCDHB18P-201ENST00000524813 2368 ntBASIC16.64■□□□□ 0.25
SOX2P48431 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX2P48431 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX2P48431 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX2P48431 CDCA4P2-201ENST00000441182 718 ntBASIC16.64■□□□□ 0.25
SOX2P48431 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms