Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPSAP43-201ENST00000402237 625 ntBASIC21.3■■□□□ 1
HTTP42858 AL023284.2-201ENST00000405850 579 ntBASIC21.3■■□□□ 1
HTTP42858 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.3■■□□□ 1
HTTP42858 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTTP42858 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.3■■□□□ 1
HTTP42858 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
HTTP42858 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HTTP42858 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.3■■□□□ 1
HTTP42858 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.3■■□□□ 1
HTTP42858 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTTP42858 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
HTTP42858 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.3■■□□□ 1
HTTP42858 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HTTP42858 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.29■■□□□ 1
HTTP42858 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.29■■□□□ 1
HTTP42858 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HTTP42858 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.29■■□□□ 1
HTTP42858 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.29■■□□□ 1
HTTP42858 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.29■■□□□ 1
HTTP42858 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.29■■□□□ 1
HTTP42858 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.29■■□□□ 1
HTTP42858 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.29■■□□□ 1
HTTP42858 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
HTTP42858 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTTP42858 AC112497.1-201ENST00000624824 639 ntBASIC21.29■■□□□ 1
HTTP42858 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 AC099343.3-201ENST00000605834 2503 ntBASIC21.28■■□□□ 1
HTTP42858 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 SDHAP1-207ENST00000440850 2000 ntBASIC21.28■■□□□ 1
HTTP42858 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.28■■□□□ 1
HTTP42858 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HTTP42858 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HTTP42858 AC090616.6-201ENST00000582640 721 ntBASIC21.28■■□□□ 1
HTTP42858 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
HTTP42858 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HTTP42858 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.28■■□□□ 1
HTTP42858 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.28■■□□□ 1
HTTP42858 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HTTP42858 MIR3180-5-201ENST00000583743 153 ntBASIC21.28■■□□□ 1
HTTP42858 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
HTTP42858 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
HTTP42858 AL512408.1-201ENST00000569378 2000 ntBASIC21.28■■□□□ 1
HTTP42858 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.28■■□□□ 1
HTTP42858 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTTP42858 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.27■■□□□ 1
HTTP42858 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HTTP42858 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.27■■□□□ 1
HTTP42858 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.27■■□□□ 1
HTTP42858 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.27■■□□□ 1
HTTP42858 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTTP42858 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.27■■□□□ 1
HTTP42858 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.27■■□□□ 1
HTTP42858 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.27■■□□□ 1
HTTP42858 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HTTP42858 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HTTP42858 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HTTP42858 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HTTP42858 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HTTP42858 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.27■□□□□ 0.99
HTTP42858 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTTP42858 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.26■□□□□ 0.99
HTTP42858 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
HTTP42858 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HTTP42858 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HTTP42858 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HTTP42858 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.26■□□□□ 0.99
HTTP42858 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.26■□□□□ 0.99
HTTP42858 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.26■□□□□ 0.99
HTTP42858 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
HTTP42858 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.26■□□□□ 0.99
HTTP42858 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms