Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MDH1P40925 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MDH1P40925 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MDH1P40925 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.03■□□□□ 0.64
MDH1P40925 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 AC091305.1-201ENST00000479476 895 ntBASIC19.03■□□□□ 0.64
MDH1P40925 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MDH1P40925 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.03■□□□□ 0.64
MDH1P40925 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.03■□□□□ 0.64
MDH1P40925 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MDH1P40925 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
MDH1P40925 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MDH1P40925 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
MDH1P40925 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MDH1P40925 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.02■□□□□ 0.64
MDH1P40925 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 AF213884.3-201ENST00000563833 479 ntBASIC19.02■□□□□ 0.64
MDH1P40925 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.02■□□□□ 0.64
MDH1P40925 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.02■□□□□ 0.64
MDH1P40925 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MDH1P40925 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.02■□□□□ 0.64
MDH1P40925 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MDH1P40925 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MDH1P40925 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.02■□□□□ 0.63
MDH1P40925 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MDH1P40925 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MDH1P40925 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MDH1P40925 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.01■□□□□ 0.63
MDH1P40925 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MDH1P40925 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.01■□□□□ 0.63
MDH1P40925 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MDH1P40925 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 AC108860.2-201ENST00000562760 2183 ntBASIC19.01■□□□□ 0.63
MDH1P40925 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.01■□□□□ 0.63
MDH1P40925 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MDH1P40925 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.01■□□□□ 0.63
MDH1P40925 PBX2P1-201ENST00000493219 1291 ntBASIC19.01■□□□□ 0.63
MDH1P40925 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.01■□□□□ 0.63
MDH1P40925 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.01■□□□□ 0.63
MDH1P40925 AL162412.1-201ENST00000567129 965 ntBASIC19.01■□□□□ 0.63
MDH1P40925 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.01■□□□□ 0.63
MDH1P40925 AC100791.3-201ENST00000617619 330 ntBASIC19.01■□□□□ 0.63
MDH1P40925 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.01■□□□□ 0.63
MDH1P40925 AC138028.4-201ENST00000564984 1845 ntBASIC19.01■□□□□ 0.63
MDH1P40925 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.01■□□□□ 0.63
MDH1P40925 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MDH1P40925 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MDH1P40925 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19■□□□□ 0.63
MDH1P40925 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MDH1P40925 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19■□□□□ 0.63
MDH1P40925 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19■□□□□ 0.63
MDH1P40925 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MDH1P40925 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms