Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.57■□□□□ 0.08
SNCAP37840 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.57■□□□□ 0.08
SNCAP37840 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.57■□□□□ 0.08
SNCAP37840 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SNCAP37840 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SNCAP37840 AC018553.1-201ENST00000616682 1458 ntBASIC15.57■□□□□ 0.08
SNCAP37840 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SNCAP37840 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 KRT17P1-201ENST00000399211 1546 ntBASIC15.57■□□□□ 0.08
SNCAP37840 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SNCAP37840 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.57■□□□□ 0.08
SNCAP37840 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SNCAP37840 Z98044.1-201ENST00000632503 1764 ntBASIC15.57■□□□□ 0.08
SNCAP37840 CROCCP1-201ENST00000426910 5675 ntBASIC15.57■□□□□ 0.08
SNCAP37840 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SNCAP37840 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.56■□□□□ 0.08
SNCAP37840 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.56■□□□□ 0.08
SNCAP37840 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 RARRES2P6-201ENST00000567333 442 ntBASIC15.56■□□□□ 0.08
SNCAP37840 MIR5787-201ENST00000611784 55 ntBASIC15.56■□□□□ 0.08
SNCAP37840 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.56■□□□□ 0.08
SNCAP37840 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.56■□□□□ 0.08
SNCAP37840 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SNCAP37840 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNCAP37840 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SNCAP37840 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.55■□□□□ 0.08
SNCAP37840 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.55■□□□□ 0.08
SNCAP37840 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.55■□□□□ 0.08
SNCAP37840 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 AC093787.1-201ENST00000450396 207 ntBASIC15.55■□□□□ 0.08
SNCAP37840 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.55■□□□□ 0.08
SNCAP37840 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SNCAP37840 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.55■□□□□ 0.08
SNCAP37840 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNCAP37840 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNCAP37840 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNCAP37840 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNCAP37840 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNCAP37840 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.54■□□□□ 0.08
SNCAP37840 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.54■□□□□ 0.08
SNCAP37840 AC093525.10-201ENST00000625130 1569 ntBASIC15.54■□□□□ 0.08
SNCAP37840 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms