Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGCLP35914 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HMGCLP35914 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCLP35914 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HMGCLP35914 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HMGCLP35914 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
HMGCLP35914 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.85■□□□□ 0.61
HMGCLP35914 AC092338.2-201ENST00000568827 1415 ntBASIC18.85■□□□□ 0.61
HMGCLP35914 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
HMGCLP35914 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCLP35914 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGCLP35914 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.85■□□□□ 0.61
HMGCLP35914 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 AC008622.2-201ENST00000617006 1229 ntBASIC18.85■□□□□ 0.61
HMGCLP35914 AC116562.4-202ENST00000641738 218 ntBASIC18.85■□□□□ 0.61
HMGCLP35914 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HMGCLP35914 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 AC087289.5-201ENST00000586076 3175 ntBASIC18.85■□□□□ 0.61
HMGCLP35914 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGCLP35914 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGCLP35914 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.84■□□□□ 0.61
HMGCLP35914 AC087499.1-201ENST00000418141 1075 ntBASIC18.84■□□□□ 0.61
HMGCLP35914 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 AC073912.3-201ENST00000624414 853 ntBASIC18.84■□□□□ 0.61
HMGCLP35914 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGCLP35914 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCLP35914 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HMGCLP35914 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.84■□□□□ 0.61
HMGCLP35914 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HMGCLP35914 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCLP35914 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HMGCLP35914 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HMGCLP35914 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.83■□□□□ 0.61
HMGCLP35914 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
HMGCLP35914 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.83■□□□□ 0.61
HMGCLP35914 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.83■□□□□ 0.6
HMGCLP35914 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGCLP35914 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.83■□□□□ 0.6
HMGCLP35914 AC068587.9-201ENST00000641814 219 ntBASIC18.83■□□□□ 0.6
HMGCLP35914 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HMGCLP35914 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HMGCLP35914 TNXA-203ENST00000507684 2038 ntBASIC18.83■□□□□ 0.6
HMGCLP35914 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 HEIH-201ENST00000623091 1652 ntBASIC18.82■□□□□ 0.6
HMGCLP35914 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMGCLP35914 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HMGCLP35914 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGCLP35914 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 AC007663.1-201ENST00000438948 1240 ntBASIC18.82■□□□□ 0.6
HMGCLP35914 AC128688.1-201ENST00000487626 519 ntBASIC18.82■□□□□ 0.6
HMGCLP35914 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
HMGCLP35914 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.82■□□□□ 0.6
HMGCLP35914 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.82■□□□□ 0.6
HMGCLP35914 AC010653.2-201ENST00000623505 997 ntBASIC18.82■□□□□ 0.6
HMGCLP35914 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGCLP35914 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGCLP35914 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms