Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GNAS-203ENST00000306120 1878 ntBASIC21.53■■□□□ 1.04
CLCN1P35523 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 KRT17P1-201ENST00000399211 1546 ntBASIC21.53■■□□□ 1.04
CLCN1P35523 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN1P35523 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.53■■□□□ 1.04
CLCN1P35523 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.53■■□□□ 1.04
CLCN1P35523 AL356309.3-201ENST00000624132 1934 ntBASIC21.53■■□□□ 1.04
CLCN1P35523 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLCN1P35523 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CLCN1P35523 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCN1P35523 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.52■■□□□ 1.04
CLCN1P35523 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.52■■□□□ 1.04
CLCN1P35523 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCN1P35523 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CLCN1P35523 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 AC134043.2-201ENST00000624206 2238 ntBASIC21.52■■□□□ 1.04
CLCN1P35523 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.52■■□□□ 1.04
CLCN1P35523 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLCN1P35523 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN1P35523 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN1P35523 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN1P35523 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLCN1P35523 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
CLCN1P35523 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCN1P35523 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCN1P35523 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CLCN1P35523 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 AL162727.3-201ENST00000635661 2787 ntBASIC21.51■■□□□ 1.03
CLCN1P35523 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CLCN1P35523 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CLCN1P35523 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.51■■□□□ 1.03
CLCN1P35523 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.51■■□□□ 1.03
CLCN1P35523 AD000864.1-201ENST00000624076 2295 ntBASIC21.51■■□□□ 1.03
CLCN1P35523 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLCN1P35523 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLCN1P35523 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCN1P35523 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CLCN1P35523 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CLCN1P35523 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CLCN1P35523 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
CLCN1P35523 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCN1P35523 MIR663A-201ENST00000385250 93 ntBASIC21.5■■□□□ 1.03
CLCN1P35523 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCN1P35523 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.5■■□□□ 1.03
CLCN1P35523 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.5■■□□□ 1.03
CLCN1P35523 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.5■■□□□ 1.03
CLCN1P35523 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.5■■□□□ 1.03
CLCN1P35523 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLCN1P35523 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLCN1P35523 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.49■■□□□ 1.03
CLCN1P35523 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CLCN1P35523 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLCN1P35523 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLCN1P35523 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.49■■□□□ 1.03
CLCN1P35523 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms