Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A4P31645 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC6A4P31645 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.43■□□□□ 0.7
SLC6A4P31645 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A4P31645 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A4P31645 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SLC6A4P31645 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A4P31645 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A4P31645 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A4P31645 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A4P31645 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A4P31645 AK4P3-201ENST00000418260 669 ntBASIC19.43■□□□□ 0.7
SLC6A4P31645 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A4P31645 COX11P1-201ENST00000489116 835 ntBASIC19.43■□□□□ 0.7
SLC6A4P31645 YBX1P2-201ENST00000489612 999 ntBASIC19.43■□□□□ 0.7
SLC6A4P31645 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A4P31645 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A4P31645 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A4P31645 AL512604.3-201ENST00000569583 964 ntBASIC19.43■□□□□ 0.7
SLC6A4P31645 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A4P31645 AL023973.1-201ENST00000624619 620 ntBASIC19.43■□□□□ 0.7
SLC6A4P31645 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A4P31645 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SLC6A4P31645 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A4P31645 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A4P31645 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A4P31645 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A4P31645 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A4P31645 AC036111.1-201ENST00000533973 1582 ntBASIC19.42■□□□□ 0.7
SLC6A4P31645 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC6A4P31645 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A4P31645 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A4P31645 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC6A4P31645 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC6A4P31645 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC6A4P31645 WWOX-216ENST00000569818 525 ntBASIC19.42■□□□□ 0.7
SLC6A4P31645 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A4P31645 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 AC011558.1-201ENST00000623459 338 ntBASIC19.42■□□□□ 0.7
SLC6A4P31645 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A4P31645 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A4P31645 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A4P31645 RCC2P3-201ENST00000418112 1537 ntBASIC19.41■□□□□ 0.7
SLC6A4P31645 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A4P31645 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A4P31645 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A4P31645 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
SLC6A4P31645 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A4P31645 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.41■□□□□ 0.7
SLC6A4P31645 AL445228.2-201ENST00000605589 952 ntBASIC19.41■□□□□ 0.7
SLC6A4P31645 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
SLC6A4P31645 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A4P31645 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A4P31645 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A4P31645 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A4P31645 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A4P31645 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC6A4P31645 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SLC6A4P31645 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.4■□□□□ 0.7
SLC6A4P31645 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 KRT18P35-201ENST00000510488 1269 ntBASIC19.4■□□□□ 0.7
SLC6A4P31645 AL441883.1-201ENST00000566170 1045 ntBASIC19.4■□□□□ 0.7
SLC6A4P31645 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A4P31645 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC6A4P31645 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A4P31645 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms