Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HOXC12P31275 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.81■□□□□ 0.28
HOXC12P31275 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOXC12P31275 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.81■□□□□ 0.28
HOXC12P31275 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 AC011506.1-201ENST00000474329 610 ntBASIC16.81■□□□□ 0.28
HOXC12P31275 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 AP000692.2-201ENST00000608391 879 ntBASIC16.81■□□□□ 0.28
HOXC12P31275 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC12P31275 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC12P31275 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 AC104417.2-201ENST00000562989 1793 ntBASIC16.81■□□□□ 0.28
HOXC12P31275 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC12P31275 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC12P31275 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC12P31275 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC12P31275 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC12P31275 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HOXC12P31275 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC12P31275 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HOXC12P31275 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HOXC12P31275 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC12P31275 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXC12P31275 ATP5G1P1-201ENST00000448724 379 ntBASIC16.8■□□□□ 0.28
HOXC12P31275 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC12P31275 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC12P31275 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC12P31275 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 AC091076.1-201ENST00000610741 619 ntBASIC16.8■□□□□ 0.28
HOXC12P31275 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXC12P31275 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXC12P31275 AC130371.2-201ENST00000619443 611 ntBASIC16.8■□□□□ 0.28
HOXC12P31275 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC12P31275 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC12P31275 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HOXC12P31275 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC12P31275 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC12P31275 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC12P31275 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HOXC12P31275 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC12P31275 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC12P31275 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HOXC12P31275 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HOXC12P31275 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 MESTP1-201ENST00000404287 994 ntBASIC16.79■□□□□ 0.28
HOXC12P31275 UPK3BP1-201ENST00000428678 509 ntBASIC16.79■□□□□ 0.28
HOXC12P31275 MFAP1P1-201ENST00000442257 1255 ntBASIC16.79■□□□□ 0.28
HOXC12P31275 AC091390.4-202ENST00000476426 537 ntBASIC16.79■□□□□ 0.28
HOXC12P31275 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.79■□□□□ 0.28
HOXC12P31275 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC12P31275 AP005242.2-201ENST00000580065 1175 ntBASIC16.79■□□□□ 0.28
HOXC12P31275 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC12P31275 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
HOXC12P31275 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC12P31275 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC12P31275 TREX1-205ENST00000625293 1783 ntBASIC16.79■□□□□ 0.28
HOXC12P31275 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HOXC12P31275 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC12P31275 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.78■□□□□ 0.28
HOXC12P31275 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC12P31275 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC12P31275 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC12P31275 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC12P31275 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC12P31275 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC12P31275 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms