Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TSPY15P-201ENST00000457163 923 ntBASIC17.35■□□□□ 0.37
SHC1P29353 AC008040.2-201ENST00000461049 708 ntBASIC17.35■□□□□ 0.37
SHC1P29353 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC1P29353 NUDT16P1-203ENST00000513809 620 ntBASIC17.35■□□□□ 0.37
SHC1P29353 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.35■□□□□ 0.37
SHC1P29353 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.35■□□□□ 0.37
SHC1P29353 AL031985.4-201ENST00000642138 673 ntBASIC17.35■□□□□ 0.37
SHC1P29353 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SHC1P29353 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHC1P29353 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SHC1P29353 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SHC1P29353 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC1P29353 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC1P29353 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC1P29353 RCC2P6-201ENST00000526625 1557 ntBASIC17.34■□□□□ 0.37
SHC1P29353 KRT8P41-201ENST00000533985 1514 ntBASIC17.34■□□□□ 0.37
SHC1P29353 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.34■□□□□ 0.37
SHC1P29353 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC1P29353 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.34■□□□□ 0.37
SHC1P29353 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.34■□□□□ 0.37
SHC1P29353 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHC1P29353 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHC1P29353 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.33■□□□□ 0.37
SHC1P29353 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
SHC1P29353 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.33■□□□□ 0.37
SHC1P29353 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
SHC1P29353 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SHC1P29353 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SHC1P29353 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.33■□□□□ 0.37
SHC1P29353 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.33■□□□□ 0.37
SHC1P29353 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SHC1P29353 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.33■□□□□ 0.36
SHC1P29353 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SHC1P29353 AL355355.2-201ENST00000442321 338 ntBASIC17.33■□□□□ 0.36
SHC1P29353 B3GAT3P1-201ENST00000471720 806 ntBASIC17.33■□□□□ 0.36
SHC1P29353 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC1P29353 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.33■□□□□ 0.36
SHC1P29353 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC1P29353 AP003071.4-201ENST00000562276 1284 ntBASIC17.33■□□□□ 0.36
SHC1P29353 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC1P29353 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.33■□□□□ 0.36
SHC1P29353 REXO1L10P-201ENST00000615707 1290 ntBASIC17.33■□□□□ 0.36
SHC1P29353 MIR6786-201ENST00000616843 113 ntBASIC17.33■□□□□ 0.36
SHC1P29353 REXO1L12P-201ENST00000622156 912 ntBASIC17.33■□□□□ 0.36
SHC1P29353 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC1P29353 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.33■□□□□ 0.36
SHC1P29353 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SHC1P29353 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SHC1P29353 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHC1P29353 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC1P29353 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC1P29353 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHC1P29353 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC1P29353 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms