Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AP000867.3-201ENST00000524675 377 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LAMA1P25391 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LAMA1P25391 AC138894.3-201ENST00000603787 634 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.53■□□□□ 0.56
LAMA1P25391 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
LAMA1P25391 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.53■□□□□ 0.56
LAMA1P25391 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.53■□□□□ 0.56
LAMA1P25391 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.53■□□□□ 0.56
LAMA1P25391 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.53■□□□□ 0.56
LAMA1P25391 AFG3L1P-217ENST00000557444 2447 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 AC004870.1-201ENST00000315132 882 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 MIR662-201ENST00000384847 95 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.53■□□□□ 0.56
LAMA1P25391 HMGN1P19-201ENST00000436976 333 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 FOSL1P1-201ENST00000511041 816 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LAMA1P25391 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.53■□□□□ 0.56
LAMA1P25391 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 AL391807.1-203ENST00000604392 2365 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 AC092183.1-201ENST00000469884 875 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 AC079776.4-201ENST00000511039 504 ntBASIC18.53■□□□□ 0.56
LAMA1P25391 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LAMA1P25391 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.52■□□□□ 0.56
LAMA1P25391 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LAMA1P25391 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LAMA1P25391 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LAMA1P25391 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.52■□□□□ 0.56
LAMA1P25391 AC079602.3-201ENST00000623931 403 ntBASIC18.52■□□□□ 0.56
LAMA1P25391 AL157888.1-201ENST00000631930 593 ntBASIC18.52■□□□□ 0.56
LAMA1P25391 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LAMA1P25391 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LAMA1P25391 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LAMA1P25391 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.52■□□□□ 0.56
LAMA1P25391 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LAMA1P25391 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.52■□□□□ 0.55
LAMA1P25391 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.52■□□□□ 0.55
LAMA1P25391 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMA1P25391 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.51■□□□□ 0.55
LAMA1P25391 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.51■□□□□ 0.55
LAMA1P25391 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LAMA1P25391 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
LAMA1P25391 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.51■□□□□ 0.55
LAMA1P25391 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.51■□□□□ 0.55
LAMA1P25391 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMA1P25391 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMA1P25391 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.51■□□□□ 0.55
LAMA1P25391 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LAMA1P25391 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.51■□□□□ 0.55
LAMA1P25391 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.51■□□□□ 0.55
LAMA1P25391 RNF126P1-202ENST00000569893 925 ntBASIC18.51■□□□□ 0.55
LAMA1P25391 AC243591.1-201ENST00000452967 1364 ntBASIC18.51■□□□□ 0.55
LAMA1P25391 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
LAMA1P25391 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LAMA1P25391 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
LAMA1P25391 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.5■□□□□ 0.55
LAMA1P25391 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LAMA1P25391 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 AC009237.14-201ENST00000609975 1594 ntBASIC18.5■□□□□ 0.55
LAMA1P25391 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
LAMA1P25391 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.5■□□□□ 0.55
LAMA1P25391 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.5■□□□□ 0.55
LAMA1P25391 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 AL121912.1-201ENST00000603683 238 ntBASIC18.5■□□□□ 0.55
LAMA1P25391 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.5■□□□□ 0.55
LAMA1P25391 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LAMA1P25391 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LAMA1P25391 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LAMA1P25391 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.49■□□□□ 0.55
LAMA1P25391 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.49■□□□□ 0.55
LAMA1P25391 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms