Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.51■□□□□ 0.39
PRKCAP17252 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKCAP17252 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKCAP17252 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRKCAP17252 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PRKCAP17252 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 KSR1P1-201ENST00000446298 240 ntBASIC17.51■□□□□ 0.39
PRKCAP17252 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRKCAP17252 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKCAP17252 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 RPS2P4-201ENST00000476944 856 ntBASIC17.51■□□□□ 0.39
PRKCAP17252 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.51■□□□□ 0.39
PRKCAP17252 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.51■□□□□ 0.39
PRKCAP17252 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.51■□□□□ 0.39
PRKCAP17252 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
PRKCAP17252 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKCAP17252 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKCAP17252 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.51■□□□□ 0.39
PRKCAP17252 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRKCAP17252 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRKCAP17252 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
PRKCAP17252 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.5■□□□□ 0.39
PRKCAP17252 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PRKCAP17252 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.5■□□□□ 0.39
PRKCAP17252 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.5■□□□□ 0.39
PRKCAP17252 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.5■□□□□ 0.39
PRKCAP17252 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.5■□□□□ 0.39
PRKCAP17252 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.5■□□□□ 0.39
PRKCAP17252 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 AC073195.1-201ENST00000607241 877 ntBASIC17.5■□□□□ 0.39
PRKCAP17252 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRKCAP17252 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKCAP17252 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRKCAP17252 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKCAP17252 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.49■□□□□ 0.39
PRKCAP17252 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PRKCAP17252 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
PRKCAP17252 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKCAP17252 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 RPS2P55-201ENST00000397318 883 ntBASIC17.49■□□□□ 0.39
PRKCAP17252 AC012618.2-201ENST00000428058 849 ntBASIC17.49■□□□□ 0.39
PRKCAP17252 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.49■□□□□ 0.39
PRKCAP17252 AC107956.1-201ENST00000494359 873 ntBASIC17.49■□□□□ 0.39
PRKCAP17252 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.49■□□□□ 0.39
PRKCAP17252 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKCAP17252 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKCAP17252 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.49■□□□□ 0.39
PRKCAP17252 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRKCAP17252 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRKCAP17252 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 KRT16P1-201ENST00000399124 1418 ntBASIC17.48■□□□□ 0.39
PRKCAP17252 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 AC004980.1-204ENST00000429707 299 ntBASIC17.48■□□□□ 0.39
PRKCAP17252 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.48■□□□□ 0.39
PRKCAP17252 AC131212.4-201ENST00000623606 975 ntBASIC17.48■□□□□ 0.39
PRKCAP17252 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PRKCAP17252 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRKCAP17252 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms