Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HIST1H1DP16402 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HIST1H1DP16402 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 AC126763.1-201ENST00000552015 2118 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 MIR663A-201ENST00000385250 93 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 AC091874.3-201ENST00000512672 1195 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 AC022517.1-201ENST00000592429 346 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 AC092118.2-201ENST00000613495 667 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 AL162741.1-201ENST00000565563 1558 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 AC092368.3-202ENST00000574180 1591 ntBASIC16.07■□□□□ 0.16
HIST1H1DP16402 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.07■□□□□ 0.16
HIST1H1DP16402 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HIST1H1DP16402 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.06■□□□□ 0.16
HIST1H1DP16402 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.06■□□□□ 0.16
HIST1H1DP16402 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 AL121829.2-201ENST00000620908 328 ntBASIC16.06■□□□□ 0.16
HIST1H1DP16402 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.06■□□□□ 0.16
HIST1H1DP16402 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HIST1H1DP16402 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 HLA-B-256ENST00000639848 1089 ntBASIC16.05■□□□□ 0.16
HIST1H1DP16402 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HIST1H1DP16402 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HIST1H1DP16402 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms