Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NCK1P16333 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NCK1P16333 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
NCK1P16333 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NCK1P16333 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
NCK1P16333 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
NCK1P16333 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.89■□□□□ 0.45
NCK1P16333 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.89■□□□□ 0.45
NCK1P16333 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NCK1P16333 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
NCK1P16333 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.89■□□□□ 0.45
NCK1P16333 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.89■□□□□ 0.45
NCK1P16333 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.89■□□□□ 0.45
NCK1P16333 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NCK1P16333 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
NCK1P16333 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.89■□□□□ 0.45
NCK1P16333 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NCK1P16333 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NCK1P16333 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.88■□□□□ 0.45
NCK1P16333 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCK1P16333 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
NCK1P16333 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.88■□□□□ 0.45
NCK1P16333 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NCK1P16333 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NCK1P16333 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.88■□□□□ 0.45
NCK1P16333 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NCK1P16333 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NCK1P16333 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.87■□□□□ 0.45
NCK1P16333 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NCK1P16333 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NCK1P16333 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.87■□□□□ 0.45
NCK1P16333 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.87■□□□□ 0.45
NCK1P16333 AC133552.2-202ENST00000575694 574 ntBASIC17.87■□□□□ 0.45
NCK1P16333 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.87■□□□□ 0.45
NCK1P16333 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.87■□□□□ 0.45
NCK1P16333 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 HTR7P1-202ENST00000624664 4411 ntBASIC17.87■□□□□ 0.45
NCK1P16333 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NCK1P16333 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
NCK1P16333 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCK1P16333 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NCK1P16333 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCK1P16333 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms