Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.46■□□□□ 0.71
BRAFP15056 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRAFP15056 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRAFP15056 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRAFP15056 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.45■□□□□ 0.7
BRAFP15056 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.45■□□□□ 0.7
BRAFP15056 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.45■□□□□ 0.7
BRAFP15056 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.45■□□□□ 0.7
BRAFP15056 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.45■□□□□ 0.7
BRAFP15056 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BRAFP15056 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRAFP15056 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.45■□□□□ 0.7
BRAFP15056 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.44■□□□□ 0.7
BRAFP15056 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.44■□□□□ 0.7
BRAFP15056 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BRAFP15056 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.44■□□□□ 0.7
BRAFP15056 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.44■□□□□ 0.7
BRAFP15056 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
BRAFP15056 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.44■□□□□ 0.7
BRAFP15056 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BRAFP15056 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.44■□□□□ 0.7
BRAFP15056 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.44■□□□□ 0.7
BRAFP15056 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.44■□□□□ 0.7
BRAFP15056 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.44■□□□□ 0.7
BRAFP15056 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.44■□□□□ 0.7
BRAFP15056 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.44■□□□□ 0.7
BRAFP15056 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.44■□□□□ 0.7
BRAFP15056 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.44■□□□□ 0.7
BRAFP15056 AC124016.1-201ENST00000609552 612 ntBASIC19.44■□□□□ 0.7
BRAFP15056 AL121829.2-201ENST00000620908 328 ntBASIC19.44■□□□□ 0.7
BRAFP15056 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
BRAFP15056 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 NOC2LP1-202ENST00000452600 2235 ntBASIC19.44■□□□□ 0.7
BRAFP15056 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRAFP15056 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BRAFP15056 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
BRAFP15056 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 AC018553.1-201ENST00000616682 1458 ntBASIC19.43■□□□□ 0.7
BRAFP15056 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 AL512353.2-201ENST00000448759 1962 ntBASIC19.43■□□□□ 0.7
BRAFP15056 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BRAFP15056 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.43■□□□□ 0.7
BRAFP15056 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
BRAFP15056 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRAFP15056 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.43■□□□□ 0.7
BRAFP15056 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms