Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT3P12035 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
KRT3P12035 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT3P12035 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KRT3P12035 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT3P12035 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT3P12035 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT3P12035 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT3P12035 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT3P12035 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT3P12035 NUDT16P1-203ENST00000513809 620 ntBASIC19.94■□□□□ 0.78
KRT3P12035 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT3P12035 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT3P12035 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT3P12035 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT3P12035 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT3P12035 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KRT3P12035 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT3P12035 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KRT3P12035 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT3P12035 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT3P12035 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT3P12035 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
KRT3P12035 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
KRT3P12035 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT3P12035 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
KRT3P12035 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT3P12035 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.93■□□□□ 0.78
KRT3P12035 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT3P12035 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT3P12035 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT3P12035 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KRT3P12035 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KRT3P12035 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT3P12035 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT3P12035 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT3P12035 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT3P12035 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
KRT3P12035 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
KRT3P12035 AC116562.2-201ENST00000507042 360 ntBASIC19.92■□□□□ 0.78
KRT3P12035 AC008550.1-201ENST00000511500 884 ntBASIC19.92■□□□□ 0.78
KRT3P12035 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT3P12035 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT3P12035 CKBP1-201ENST00000565489 1086 ntBASIC19.92■□□□□ 0.78
KRT3P12035 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT3P12035 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 AP000692.2-201ENST00000608391 879 ntBASIC19.92■□□□□ 0.78
KRT3P12035 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT3P12035 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT3P12035 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT3P12035 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT3P12035 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT3P12035 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT3P12035 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.91■□□□□ 0.78
KRT3P12035 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT3P12035 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms