Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CD48P09326 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.63■□□□□ 0.73
CD48P09326 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.63■□□□□ 0.73
CD48P09326 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD48P09326 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CD48P09326 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.62■□□□□ 0.73
CD48P09326 PRSS44-201ENST00000515154 1146 ntBASIC19.62■□□□□ 0.73
CD48P09326 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.62■□□□□ 0.73
CD48P09326 Z99916.2-201ENST00000604037 246 ntBASIC19.62■□□□□ 0.73
CD48P09326 AC113410.3-201ENST00000623366 203 ntBASIC19.62■□□□□ 0.73
CD48P09326 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.62■□□□□ 0.73
CD48P09326 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.62■□□□□ 0.73
CD48P09326 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD48P09326 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD48P09326 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CD48P09326 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.61■□□□□ 0.73
CD48P09326 AL135905.2-201ENST00000584934 1404 ntBASIC19.61■□□□□ 0.73
CD48P09326 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CD48P09326 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD48P09326 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD48P09326 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CD48P09326 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.61■□□□□ 0.73
CD48P09326 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.61■□□□□ 0.73
CD48P09326 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD48P09326 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CD48P09326 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.61■□□□□ 0.73
CD48P09326 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 ANO7L1-203ENST00000602586 1720 ntBASIC19.61■□□□□ 0.73
CD48P09326 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD48P09326 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CD48P09326 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.6■□□□□ 0.73
CD48P09326 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
CD48P09326 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.6■□□□□ 0.73
CD48P09326 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CD48P09326 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CD48P09326 FAM207BP-201ENST00000447172 505 ntBASIC19.6■□□□□ 0.73
CD48P09326 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.6■□□□□ 0.73
CD48P09326 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 CKBP1-201ENST00000565489 1086 ntBASIC19.6■□□□□ 0.73
CD48P09326 AC233702.5-201ENST00000584107 538 ntBASIC19.6■□□□□ 0.73
CD48P09326 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.6■□□□□ 0.73
CD48P09326 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.6■□□□□ 0.73
CD48P09326 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CD48P09326 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD48P09326 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.6■□□□□ 0.73
CD48P09326 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
CD48P09326 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms